Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Upstream-Name: Mothur
Upstream-Contact: Patrick D. Schloss <pschloss@umich.edu>
Source: http://www.mothur.org/wiki/Download_mothur

Files: *
Copyright: © 2009-2012 Schloss Lab UMASS Amhers., Patrick Schloss <pschloss@umich.edu>
License: GPL-3+
Comment: The license is stated in the file mothur.cpp and at the
 project web page http://www.mothur.org/wiki/Mothur_license. Please
 note that not every single file in the source is edited to reflect
 the license, however we got confirmation about this license from
 upstream.

Files: source/clearcut/*
Copyright: © 2004, Luke Sheneman
License: BSD-3-clause

Files: source/calculators/prng.cpp
Copyright: © 1997 - 2002, Makoto Matsumoto and Takuji Nishimura
License: BSD-3-clause

Files: source/clearcut/getopt_long.*
Copyright: © 2004 Koji Arai
License: MIT

Files: debian/*
Copyright: © 2010 Sri Girish Srinivasa Murthy <srigirish@evolbio.mpg.de>
           © 2011-2012 Andreas Tille <tille@debian.org>
           © 2015 Tomasz Buchert <tomasz@debian.org>
License: GPL-3+

License: GPL-3+
 This program is free software: you can redistribute it and/or modify
 it under the terms of the GNU General Public License as published by
 the Free Software Foundation, either version 3 of the License, or
 (at your option) any later version.
 .
 This program is distributed in the hope that it will be useful,
 but WITHOUT ANY WARRANTY; without even the implied warranty of
 MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 GNU General Public License for more details.
 .
 You should have received a copy of the GNU General Public License
 along with this program.  If not, see <http://www.gnu.org/licenses/>.
 .
 On Debian systems, the full text of the GNU General Public License version 3
 can be found in the file `/usr/share/common-licenses/GPL-3'.

License: BSD-3-clause
 Redistribution and use in source and binary forms, with or without
 modification, are permitted provided that the following conditions
 are met:
 .
     1. Redistributions of source code must retain the above copyright
        notice, this list of conditions and the following disclaimer.
 .
     2. Redistributions in binary form must reproduce the above copyright
        notice, this list of conditions and the following disclaimer in the
        documentation and/or other materials provided with the distribution.
 .
     3. The names of its contributors may not be used to endorse or promote
        products derived from this software without specific prior written
        permission.
 .
 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
 "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
 LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
 A PARTICULAR PURPOSE ARE DISCLAIMED.  IN NO EVENT SHALL THE COPYRIGHT OWNER OR
 CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
 EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
 PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
 PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
 LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
 NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
 SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

License: MIT
 Permission is hereby granted, free of charge, to any person
 obtaining a copy of this software and associated documentation files
 (the "Software"), to deal in the Software without restriction,
 including without limitation the rights to use, copy, modify, merge,
 publish, distribute, sublicense, and/or sell copies of the Software,
 and to permit persons to whom the Software is furnished to do so,
 subject to the following conditions:
 .
 The above copyright notice and this permission notice shall be
 included in all copies or substantial portions of the Software.
 .
 THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
 EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
 MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
 NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS
 BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN
 ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN
 CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
 SOFTWARE.
Comment: This getopt_long() is compatible with GNU's, however, added original
 extension (short 1 byte option).
